STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UPZ35-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (645 aa)    
Predicted Functional Partners:
A0A1V6VA28
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.815
A0A1V6V5L1
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.807
A0A1V6UXR2
PALP domain-containing protein.
    
 0.804
A0A1V6V8Y0
Tryptophan synthase.
    
 0.804
A0A1V6UH61
Aminotran_5 domain-containing protein.
    
 0.787
A0A1V6U8M2
Uncharacterized protein; Belongs to the ALAD family.
    
 0.785
A0A1V6UIC9
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.785
A0A1V6URC7
Uncharacterized protein.
     
 0.779
A0A1V6UVG0
Uncharacterized protein.
     
 0.779
A0A1V6USH7
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.761
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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