STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6US09Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
A0A1V6URC7
Uncharacterized protein.
     
 0.877
A0A1V6UVG0
Uncharacterized protein.
     
 0.877
A0A1V6US68
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.875
A0A1V6V0Y2
acidPPc domain-containing protein.
   
 0.851
A0A1V6V5U0
Neutral ceramidase.
    
 0.844
A0A1V6UH88
Uncharacterized protein.
    
 0.838
A0A1V6UCC3
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.837
A0A1V6UFQ6
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
    
  0.799
A0A1V6U7X5
Uncharacterized protein.
    
 0.761
A0A1V6UZ79
Uncharacterized protein.
    
 0.761
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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