STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UV80Epimerase domain-containing protein. (328 aa)    
Predicted Functional Partners:
A0A1V6UV32
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.836
A0A1V6UYW6
S10_plectin domain-containing protein.
   
 0.835
A0A1V6UJ95
Uncharacterized protein.
   
  0.832
A0A1V6V5B9
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.831
A0A1V6V5R4
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.831
A0A1V6ULR5
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.828
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.827
A0A1V6UZ33
Uncharacterized protein.
   
 0.826
A0A1V6UF42
Ribosomal_S10 domain-containing protein.
   
  0.823
A0A1V6UXD0
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
  0.817
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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