STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UVM5Nascent polypeptide-associated complex subunit beta. (162 aa)    
Predicted Functional Partners:
A0A1V6UAD8
NAC-A/B domain-containing protein.
   
 
 0.997
A0A1V6URM2
Uncharacterized protein.
   
 
 0.974
A0A1V6UCZ8
Ribosomal_L23eN domain-containing protein.
   
 
 0.964
A0A1V6UJP3
Uncharacterized protein.
   
   0.963
A0A1V6UNQ4
Ribosomal_L7Ae domain-containing protein.
   
   0.960
A0A1V6V9F7
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.957
A0A1V6V9M8
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.957
A0A1V6UHK1
Uncharacterized protein.
   
   0.956
A0A1V6UTR9
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.955
A0A1V6UPD1
Ribosomal_L2_C domain-containing protein.
   
   0.952
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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