STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6V1Y6WD_REPEATS_REGION domain-containing protein. (492 aa)    
Predicted Functional Partners:
A0A1V6UAJ4
Uncharacterized protein.
   
   0.951
A0A1V6URQ6
Uncharacterized protein.
   
 
 0.913
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.902
A0A1V6UXG6
RNA helicase.
   
   0.885
A0A1V6V8S5
WD_REPEATS_REGION domain-containing protein.
   
 
 0.879
A0A1V6UN55
Uncharacterized protein.
   
 
 0.875
A0A1V6V9B7
Uncharacterized protein.
   
 
 0.872
A0A1V6UVK1
WD_REPEATS_REGION domain-containing protein.
  
  
 0.861
A0A1V6UHM3
CP-type G domain-containing protein.
   
 
 0.859
A0A1V6UIN8
WD_REPEATS_REGION domain-containing protein.
   
  
 0.852
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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