STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6V864CASP_C domain-containing protein. (754 aa)    
Predicted Functional Partners:
A0A1V6UGW9
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.628
A0A1V6UH19
Guanylate kinase-like domain-containing protein.
    
 
 0.555
A0A1V6V9W1
Guanylate kinase-like domain-containing protein.
    
 
 0.555
A0A1V6UKH7
Uncharacterized protein.
    
   0.530
A0A1V6UZP6
Cog4 domain-containing protein.
    
 0.475
A0A1V6V5W6
GRASP55_65 domain-containing protein.
      
 0.448
A0A1V6UM13
Uncharacterized protein.
    
   0.429
A0A1V6URK2
Uncharacterized protein.
    
   0.429
A0A1V6UVE0
Uncharacterized protein.
    
   0.429
A0A1V6UJB8
t-SNARE coiled-coil homology domain-containing protein.
    
 0.418
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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