STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6VA43DNA_binding_1 domain-containing protein. (131 aa)    
Predicted Functional Partners:
A0A1V6UEC7
ENDO3c domain-containing protein.
  
 
 0.638
A0A1V6UPI4
ENDO3c domain-containing protein.
  
 
 0.638
A0A1V6U8R7
Fe2OG dioxygenase domain-containing protein.
  
  
 0.596
A0A1V6V5F4
HECT domain-containing protein.
    
 
 0.515
A0A1V6V305
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
  
 0.460
A0A1V6V983
Helicase ATP-binding domain-containing protein.
     
 0.459
A0A1V6UAF8
XPA_C domain-containing protein.
    
 
 0.454
A0A1V6UJE8
Uncharacterized protein.
     
 0.446
A0A1V6V269
DNA_mis_repair domain-containing protein.
   
 
 0.428
NTH1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.
     
 0.400
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.