Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFH80_02745 | GCA_001548055_00349 | GCA_001548055_00600 | GCA_001548055_00349 | Unannotated protein. | Unannotated protein. | 0.995 |
CFH80_02745 | GCA_001548055_00351 | GCA_001548055_00600 | GCA_001548055_00351 | Unannotated protein. | Unannotated protein. | 0.842 |
CFH80_02745 | GCA_001548055_00352 | GCA_001548055_00600 | GCA_001548055_00352 | Unannotated protein. | Unannotated protein. | 0.757 |
CFH80_08380 | CFH80_08385 | GCA_001548055_01991 | GCA_001548055_01990 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.969 |
CFH80_08380 | GCA_001548055_00351 | GCA_001548055_01991 | GCA_001548055_00351 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.906 |
CFH80_08380 | GCA_001548055_00352 | GCA_001548055_01991 | GCA_001548055_00352 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.901 |
CFH80_08380 | gatB | GCA_001548055_01991 | GCA_001548055_01445 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.885 |
CFH80_08380 | gatC | GCA_001548055_01991 | GCA_001548055_02114 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.627 |
CFH80_08380 | gltX | GCA_001548055_01991 | GCA_001548055_00126 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.956 |
CFH80_08385 | CFH80_08380 | GCA_001548055_01990 | GCA_001548055_01991 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.969 |
CFH80_08385 | GCA_001548055_00351 | GCA_001548055_01990 | GCA_001548055_00351 | Unannotated protein. | Unannotated protein. | 0.995 |
CFH80_08385 | GCA_001548055_00352 | GCA_001548055_01990 | GCA_001548055_00352 | Unannotated protein. | Unannotated protein. | 0.995 |
CFH80_08385 | gatB | GCA_001548055_01990 | GCA_001548055_01445 | Unannotated protein. | Unannotated protein. | 0.987 |
CFH80_08385 | gatC | GCA_001548055_01990 | GCA_001548055_02114 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.999 |
CFH80_08385 | gltX | GCA_001548055_01990 | GCA_001548055_00126 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.870 |
GCA_001548055_00347 | GCA_001548055_00348 | GCA_001548055_00347 | GCA_001548055_00348 | Unannotated protein. | Unannotated protein. | 0.816 |
GCA_001548055_00347 | GCA_001548055_00349 | GCA_001548055_00347 | GCA_001548055_00349 | Unannotated protein. | Unannotated protein. | 0.943 |
GCA_001548055_00347 | GCA_001548055_00351 | GCA_001548055_00347 | GCA_001548055_00351 | Unannotated protein. | Unannotated protein. | 0.893 |
GCA_001548055_00347 | GCA_001548055_00352 | GCA_001548055_00347 | GCA_001548055_00352 | Unannotated protein. | Unannotated protein. | 0.900 |
GCA_001548055_00348 | GCA_001548055_00347 | GCA_001548055_00348 | GCA_001548055_00347 | Unannotated protein. | Unannotated protein. | 0.816 |
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