STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFH80_05065Unannotated protein. (807 aa)    
Predicted Functional Partners:
GCA_001548055_00259
Unannotated protein.
  
 
 0.929
CFH80_04335
Unannotated protein.
  
 
 0.926
ccoS
Unannotated protein.
  
  
 0.838
CFH80_04530
Unannotated protein.
       0.560
nifJ
Unannotated protein.
     
 0.499
ribD
Unannotated protein.
  
    0.455
GCA_001548055_00483
Unannotated protein.
 
   
 0.426
GCA_001548055_00979
Unannotated protein.
  
  
 0.414
GCA_001548055_02683
Unannotated protein.
 
   
 0.412
GCA_001548055_00487
Unannotated protein.
 
   
 0.409
Your Current Organism:
Sulfurospirillum cavolei
NCBI taxonomy Id: 366522
Other names: DSM 18149, JCM 13918, S. cavolei, Sulfurospirillum cavolei Kodama et al. 2007, Sulfurospirillum sp. Phe 91, strain Phe91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.