STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001548055_01191Unannotated protein. (373 aa)    
Predicted Functional Partners:
CFH80_00180
Unannotated protein.
    0.995
GCA_001548055_01193
Unannotated protein.
 
  
 0.959
CFH80_07875
Unannotated protein.
 
 
 0.911
lptB
Unannotated protein.
    
 0.903
GCA_001548055_00346
Unannotated protein.
      0.887
CFH80_00170
Unannotated protein.
 
    
0.852
CFH80_04585
Unannotated protein.
 
   
 0.781
CFH80_00045
Unannotated protein.
    
 0.775
GCA_001548055_02362
Unannotated protein.
 
      0.762
CFH80_04145
Unannotated protein.
 
 
 0.749
Your Current Organism:
Sulfurospirillum cavolei
NCBI taxonomy Id: 366522
Other names: DSM 18149, JCM 13918, S. cavolei, Sulfurospirillum cavolei Kodama et al. 2007, Sulfurospirillum sp. Phe 91, strain Phe91
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.