STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpBUnannotated protein. (401 aa)    
Predicted Functional Partners:
trpC
Unannotated protein; Belongs to the TrpC family.
 
 0.999
GCA_001548055_02289
Unannotated protein.
 0.999
trpD
Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 
 0.976
trpF
Unannotated protein; Belongs to the TrpF family.
 
 0.972
CFH80_05895
Unannotated protein.
  
  
 
0.971
CFH80_08330
Unannotated protein.
  
0.962
serB
Unannotated protein.
   
 
 0.952
glyA-2
Unannotated protein.
     
 0.946
CFH80_05600
Unannotated protein.
 
 
 0.926
CFH80_01340
Unannotated protein.
 
  
 0.864
Your Current Organism:
Sulfurospirillum cavolei
NCBI taxonomy Id: 366522
Other names: DSM 18149, JCM 13918, S. cavolei, Sulfurospirillum cavolei Kodama et al. 2007, Sulfurospirillum sp. Phe 91, strain Phe91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.