STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001548055_02248Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_001548055_02366
Unannotated protein.
  
 
 0.992
GCA_001548055_02367
Unannotated protein.
   
 
 0.990
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.978
GCA_001548055_02264
Unannotated protein.
   
 
 0.961
nusG
Unannotated protein; Participates in transcription elongation, termination and antitermination.
   
 
 0.958
rpoZ
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 0.947
CFH80_01760
Unannotated protein.
  
  
 0.918
CFH80_00200
Unannotated protein.
 
  
 0.906
CFH80_07360
Unannotated protein.
 
  
 0.860
GCA_001548055_00030
Unannotated protein.
  
  
 0.826
Your Current Organism:
Sulfurospirillum cavolei
NCBI taxonomy Id: 366522
Other names: DSM 18149, JCM 13918, S. cavolei, Sulfurospirillum cavolei Kodama et al. 2007, Sulfurospirillum sp. Phe 91, strain Phe91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.