STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serBUnannotated protein. (206 aa)    
Predicted Functional Partners:
glyA-2
Unannotated protein.
   
 0.977
hisI
Unannotated protein; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.953
CFH80_05895
Unannotated protein.
   
 
 0.952
trpB
Unannotated protein.
   
 
 0.952
CFH80_08330
Unannotated protein.
    
 0.950
pssA
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.946
GCA_001548055_02289
Unannotated protein.
   
 
 0.943
glyA
Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 0.907
GCA_001548055_01247
Unannotated protein.
    
 0.850
GCA_001548055_00969
Unannotated protein.
    
 0.831
Your Current Organism:
Sulfurospirillum cavolei
NCBI taxonomy Id: 366522
Other names: DSM 18149, JCM 13918, S. cavolei, Sulfurospirillum cavolei Kodama et al. 2007, Sulfurospirillum sp. Phe 91, strain Phe91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.