STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE35216.1Hypothetical protein; Belongs to the GcvT family. (250 aa)    
Predicted Functional Partners:
SHE35283.1
Tyrosine phosphatase family protein.
       0.837
SHE35250.1
ATP-binding cassette, subfamily B, MsbA.
       0.797
SHE40315.1
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
   
 0.656
SHE61956.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.633
SHE84564.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.615
SHF35706.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
 
 0.615
SHF09903.1
Glutathione S-transferase.
  
    0.607
SHE35316.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
       0.601
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
   
 0.462
SHE40348.1
Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
  
   
 0.461
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
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