Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE59583.1 | SHE59626.1 | SAMN05444339_101834 | SAMN05444339_101835 | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | 2-methylcitrate dehydratase PrpD. | 0.642 |
SHE59583.1 | SHE59664.1 | SAMN05444339_101834 | SAMN05444339_101836 | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | Acyl-CoA dehydrogenase. | 0.694 |
SHE59583.1 | SHE59700.1 | SAMN05444339_101834 | SAMN05444339_101837 | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.534 |
SHE59583.1 | SHE59737.1 | SAMN05444339_101834 | SAMN05444339_101838 | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | 3-methylfumaryl-CoA hydratase. | 0.473 |
SHE59626.1 | SHE59583.1 | SAMN05444339_101835 | SAMN05444339_101834 | 2-methylcitrate dehydratase PrpD. | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | 0.642 |
SHE59626.1 | SHE59664.1 | SAMN05444339_101835 | SAMN05444339_101836 | 2-methylcitrate dehydratase PrpD. | Acyl-CoA dehydrogenase. | 0.822 |
SHE59626.1 | SHE59700.1 | SAMN05444339_101835 | SAMN05444339_101837 | 2-methylcitrate dehydratase PrpD. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.756 |
SHE59626.1 | SHE59737.1 | SAMN05444339_101835 | SAMN05444339_101838 | 2-methylcitrate dehydratase PrpD. | 3-methylfumaryl-CoA hydratase. | 0.934 |
SHE59664.1 | SHE59583.1 | SAMN05444339_101836 | SAMN05444339_101834 | Acyl-CoA dehydrogenase. | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | 0.694 |
SHE59664.1 | SHE59626.1 | SAMN05444339_101836 | SAMN05444339_101835 | Acyl-CoA dehydrogenase. | 2-methylcitrate dehydratase PrpD. | 0.822 |
SHE59664.1 | SHE59700.1 | SAMN05444339_101836 | SAMN05444339_101837 | Acyl-CoA dehydrogenase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.722 |
SHE59664.1 | SHE59737.1 | SAMN05444339_101836 | SAMN05444339_101838 | Acyl-CoA dehydrogenase. | 3-methylfumaryl-CoA hydratase. | 0.712 |
SHE59664.1 | SHE90565.1 | SAMN05444339_101836 | SAMN05444339_102413 | Acyl-CoA dehydrogenase. | (R)-ethylmalonyl-CoA mutase. | 0.703 |
SHE59664.1 | SHF42728.1 | SAMN05444339_101836 | SAMN05444339_10645 | Acyl-CoA dehydrogenase. | methylmalonyl-CoA mutase. | 0.703 |
SHE59700.1 | SHE59583.1 | SAMN05444339_101837 | SAMN05444339_101834 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | LysR family transcriptional regulator, nitrogen assimilation regulatory protein. | 0.534 |
SHE59700.1 | SHE59626.1 | SAMN05444339_101837 | SAMN05444339_101835 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 2-methylcitrate dehydratase PrpD. | 0.756 |
SHE59700.1 | SHE59664.1 | SAMN05444339_101837 | SAMN05444339_101836 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | Acyl-CoA dehydrogenase. | 0.722 |
SHE59700.1 | SHE59737.1 | SAMN05444339_101837 | SAMN05444339_101838 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 3-methylfumaryl-CoA hydratase. | 0.765 |
SHE59700.1 | SHE90565.1 | SAMN05444339_101837 | SAMN05444339_102413 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | (R)-ethylmalonyl-CoA mutase. | 0.740 |
SHE59700.1 | SHF42728.1 | SAMN05444339_101837 | SAMN05444339_10645 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | methylmalonyl-CoA mutase. | 0.740 |
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