STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE60004.1Hydroxypyruvate isomerase; Belongs to the hyi family. (260 aa)    
Predicted Functional Partners:
SHE60078.1
2-keto-myo-inositol dehydratase.
 
  
  0.913
SHE60157.1
5-dehydro-2-deoxygluconokinase.
 
     0.891
SHE60118.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
     0.886
SHF58470.1
Glyoxylate/hydroxypyruvate reductase A.
  
 
  0.884
SHE60042.1
5-deoxyglucuronate isomerase.
 
     0.878
SHE60196.1
Predicted dehydrogenase.
 
    0.856
SHE60233.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
     0.802
SHE60274.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.791
SHF08619.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.770
SHE60316.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
     0.758
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
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