STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE92430.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SHE93161.1
Hypothetical protein.
  
     0.671
SHE92400.1
DUF218 domain-containing protein.
 
     0.616
SHF11845.1
Hypothetical protein.
  
     0.602
SHF62660.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
  
     0.581
SHE83655.1
Cell division and transport-associated protein TolA.
  
     0.568
SHF24541.1
Hypothetical protein.
  
     0.568
SHF53170.1
Lipid A oxidase.
  
     0.564
SHF12693.1
Glycosyl transferases group 1.
  
     0.551
SHF23973.1
Cytochrome c.
  
     0.540
SHE40206.1
Hypothetical protein.
  
     0.538
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.