Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE88152.1 | SHF36028.1 | SAMN05444339_102333 | SAMN05444339_105181 | Predicted choloylglycine hydrolase. | Hypothetical protein. | 0.814 |
SHE88152.1 | SHF36056.1 | SAMN05444339_102333 | SAMN05444339_105182 | Predicted choloylglycine hydrolase. | Arginine decarboxylase. | 0.814 |
SHE88152.1 | SHF36086.1 | SAMN05444339_102333 | SAMN05444339_105183 | Predicted choloylglycine hydrolase. | Predicted amidohydrolase. | 0.785 |
SHE88152.1 | SHF36111.1 | SAMN05444339_102333 | SAMN05444339_105184 | Predicted choloylglycine hydrolase. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.610 |
SHF09641.1 | SHF36028.1 | SAMN05444339_103264 | SAMN05444339_105181 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Hypothetical protein. | 0.420 |
SHF09641.1 | SHF36086.1 | SAMN05444339_103264 | SAMN05444339_105183 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Predicted amidohydrolase. | 0.751 |
SHF09843.1 | SHF11407.1 | SAMN05444339_103272 | SAMN05444339_103321 | Glutamate synthase (NADPH) large subunit. | Aldehyde dehydrogenase (NAD+). | 0.924 |
SHF09843.1 | SHF36028.1 | SAMN05444339_103272 | SAMN05444339_105181 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein. | 0.919 |
SHF09843.1 | SHF36086.1 | SAMN05444339_103272 | SAMN05444339_105183 | Glutamate synthase (NADPH) large subunit. | Predicted amidohydrolase. | 0.874 |
SHF09843.1 | SHF36111.1 | SAMN05444339_103272 | SAMN05444339_105184 | Glutamate synthase (NADPH) large subunit. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.911 |
SHF09843.1 | SHF36446.1 | SAMN05444339_103272 | SAMN05444339_105196 | Glutamate synthase (NADPH) large subunit. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.999 |
SHF11407.1 | SHF09843.1 | SAMN05444339_103321 | SAMN05444339_103272 | Aldehyde dehydrogenase (NAD+). | Glutamate synthase (NADPH) large subunit. | 0.924 |
SHF11407.1 | SHF36086.1 | SAMN05444339_103321 | SAMN05444339_105183 | Aldehyde dehydrogenase (NAD+). | Predicted amidohydrolase. | 0.741 |
SHF11407.1 | SHF36111.1 | SAMN05444339_103321 | SAMN05444339_105184 | Aldehyde dehydrogenase (NAD+). | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.910 |
SHF11407.1 | SHF36446.1 | SAMN05444339_103321 | SAMN05444339_105196 | Aldehyde dehydrogenase (NAD+). | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.880 |
SHF35998.1 | SHF36028.1 | SAMN05444339_105180 | SAMN05444339_105181 | Predicted choloylglycine hydrolase. | Hypothetical protein. | 0.956 |
SHF35998.1 | SHF36056.1 | SAMN05444339_105180 | SAMN05444339_105182 | Predicted choloylglycine hydrolase. | Arginine decarboxylase. | 0.951 |
SHF35998.1 | SHF36086.1 | SAMN05444339_105180 | SAMN05444339_105183 | Predicted choloylglycine hydrolase. | Predicted amidohydrolase. | 0.895 |
SHF35998.1 | SHF36111.1 | SAMN05444339_105180 | SAMN05444339_105184 | Predicted choloylglycine hydrolase. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.723 |
SHF36028.1 | SHE88152.1 | SAMN05444339_105181 | SAMN05444339_102333 | Hypothetical protein. | Predicted choloylglycine hydrolase. | 0.814 |
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