STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF41996.1Sorbitol ABC transporter ATP-binding protein. (334 aa)    
Predicted Functional Partners:
SHF42028.1
Sorbitol ABC transporter membrane protein.
 
 0.998
SHF42058.1
Sorbitol ABC transporter membrane protein.
 
  0.997
SHF42087.1
Sorbitol-binding protein /mannitol-binding protein.
 
  0.987
SHE77315.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.887
SHF63540.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.875
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  0.870
SHF63568.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.870
SHE77291.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.856
SHF62994.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.850
SHF64376.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.847
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.