STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF62200.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (324 aa)    
Predicted Functional Partners:
SHF62174.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SHF62225.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.996
SHF62257.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  0.993
SHF08122.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.982
SHF08192.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.982
SHF37087.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.981
SHF62133.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
  0.977
SHF37139.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.975
SHF51004.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.972
SHF37163.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  0.963
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
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