Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE85627.1 | SHE85658.1 | SAMN05444339_102261 | SAMN05444339_102262 | Glycosyltransferase like family 2. | Nodulation protein S (NodS). | 0.946 |
SHE85627.1 | SHE85690.1 | SAMN05444339_102261 | SAMN05444339_102263 | Glycosyltransferase like family 2. | N-acetylglucosaminyl deacetylase, LmbE family. | 0.951 |
SHE85627.1 | SHE85721.1 | SAMN05444339_102261 | SAMN05444339_102264 | Glycosyltransferase like family 2. | Acyl-CoA dehydrogenase. | 0.951 |
SHE85627.1 | SHF62381.1 | SAMN05444339_102261 | SAMN05444339_10942 | Glycosyltransferase like family 2. | Glycosyltransferase involved in cell wall bisynthesis. | 0.542 |
SHE85627.1 | SHF62416.1 | SAMN05444339_102261 | SAMN05444339_10943 | Glycosyltransferase like family 2. | Glycosyltransferase, GT2 family. | 0.575 |
SHE85627.1 | SHF62444.1 | SAMN05444339_102261 | SAMN05444339_10944 | Glycosyltransferase like family 2. | Glycosyltransferase family 28 C-terminal domain-containing protein. | 0.484 |
SHE85627.1 | SHF62474.1 | SAMN05444339_102261 | SAMN05444339_10945 | Glycosyltransferase like family 2. | Sucrose-phosphate synthase. | 0.457 |
SHE85627.1 | SHF79393.1 | SAMN05444339_102261 | SAMN05444339_11319 | Glycosyltransferase like family 2. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.436 |
SHE85658.1 | SHE85627.1 | SAMN05444339_102262 | SAMN05444339_102261 | Nodulation protein S (NodS). | Glycosyltransferase like family 2. | 0.946 |
SHE85658.1 | SHE85690.1 | SAMN05444339_102262 | SAMN05444339_102263 | Nodulation protein S (NodS). | N-acetylglucosaminyl deacetylase, LmbE family. | 0.954 |
SHE85658.1 | SHE85721.1 | SAMN05444339_102262 | SAMN05444339_102264 | Nodulation protein S (NodS). | Acyl-CoA dehydrogenase. | 0.954 |
SHE85658.1 | SHF62381.1 | SAMN05444339_102262 | SAMN05444339_10942 | Nodulation protein S (NodS). | Glycosyltransferase involved in cell wall bisynthesis. | 0.616 |
SHE85658.1 | SHF62416.1 | SAMN05444339_102262 | SAMN05444339_10943 | Nodulation protein S (NodS). | Glycosyltransferase, GT2 family. | 0.694 |
SHE85658.1 | SHF62444.1 | SAMN05444339_102262 | SAMN05444339_10944 | Nodulation protein S (NodS). | Glycosyltransferase family 28 C-terminal domain-containing protein. | 0.670 |
SHE85690.1 | SHE85627.1 | SAMN05444339_102263 | SAMN05444339_102261 | N-acetylglucosaminyl deacetylase, LmbE family. | Glycosyltransferase like family 2. | 0.951 |
SHE85690.1 | SHE85658.1 | SAMN05444339_102263 | SAMN05444339_102262 | N-acetylglucosaminyl deacetylase, LmbE family. | Nodulation protein S (NodS). | 0.954 |
SHE85690.1 | SHE85721.1 | SAMN05444339_102263 | SAMN05444339_102264 | N-acetylglucosaminyl deacetylase, LmbE family. | Acyl-CoA dehydrogenase. | 0.956 |
SHE85690.1 | SHF62381.1 | SAMN05444339_102263 | SAMN05444339_10942 | N-acetylglucosaminyl deacetylase, LmbE family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.642 |
SHE85690.1 | SHF62416.1 | SAMN05444339_102263 | SAMN05444339_10943 | N-acetylglucosaminyl deacetylase, LmbE family. | Glycosyltransferase, GT2 family. | 0.691 |
SHE85690.1 | SHF62444.1 | SAMN05444339_102263 | SAMN05444339_10944 | N-acetylglucosaminyl deacetylase, LmbE family. | Glycosyltransferase family 28 C-terminal domain-containing protein. | 0.685 |
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