Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF09843.1 | SHF62562.1 | SAMN05444339_103272 | SAMN05444339_10948 | Glutamate synthase (NADPH) large subunit. | Trehalose synthase /maltokinase. | 0.633 |
SHF09843.1 | SHF68082.1 | SAMN05444339_103272 | SAMN05444339_11058 | Glutamate synthase (NADPH) large subunit. | Transcriptional regulator, LacI family. | 0.945 |
SHF20070.1 | SHF68082.1 | SAMN05444339_10476 | SAMN05444339_11058 | Phosphocarrier protein. | Transcriptional regulator, LacI family. | 0.873 |
SHF62562.1 | SHF09843.1 | SAMN05444339_10948 | SAMN05444339_103272 | Trehalose synthase /maltokinase. | Glutamate synthase (NADPH) large subunit. | 0.633 |
SHF62562.1 | SHF68082.1 | SAMN05444339_10948 | SAMN05444339_11058 | Trehalose synthase /maltokinase. | Transcriptional regulator, LacI family. | 0.576 |
SHF68028.1 | SHF68054.1 | SAMN05444339_11056 | SAMN05444339_11057 | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Acyl dehydratase. | 0.970 |
SHF68028.1 | SHF68082.1 | SAMN05444339_11056 | SAMN05444339_11058 | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Transcriptional regulator, LacI family. | 0.586 |
SHF68028.1 | SHF68118.1 | SAMN05444339_11056 | SAMN05444339_11059 | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.400 |
SHF68054.1 | SHF68028.1 | SAMN05444339_11057 | SAMN05444339_11056 | Acyl dehydratase. | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.970 |
SHF68054.1 | SHF68082.1 | SAMN05444339_11057 | SAMN05444339_11058 | Acyl dehydratase. | Transcriptional regulator, LacI family. | 0.580 |
SHF68054.1 | SHF68118.1 | SAMN05444339_11057 | SAMN05444339_11059 | Acyl dehydratase. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.400 |
SHF68082.1 | SHF09843.1 | SAMN05444339_11058 | SAMN05444339_103272 | Transcriptional regulator, LacI family. | Glutamate synthase (NADPH) large subunit. | 0.945 |
SHF68082.1 | SHF20070.1 | SAMN05444339_11058 | SAMN05444339_10476 | Transcriptional regulator, LacI family. | Phosphocarrier protein. | 0.873 |
SHF68082.1 | SHF62562.1 | SAMN05444339_11058 | SAMN05444339_10948 | Transcriptional regulator, LacI family. | Trehalose synthase /maltokinase. | 0.576 |
SHF68082.1 | SHF68028.1 | SAMN05444339_11058 | SAMN05444339_11056 | Transcriptional regulator, LacI family. | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.586 |
SHF68082.1 | SHF68054.1 | SAMN05444339_11058 | SAMN05444339_11057 | Transcriptional regulator, LacI family. | Acyl dehydratase. | 0.580 |
SHF68082.1 | SHF68118.1 | SAMN05444339_11058 | SAMN05444339_11059 | Transcriptional regulator, LacI family. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.832 |
SHF68082.1 | SHF68146.1 | SAMN05444339_11058 | SAMN05444339_11060 | Transcriptional regulator, LacI family. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.677 |
SHF68082.1 | SHF68176.1 | SAMN05444339_11058 | SAMN05444339_11061 | Transcriptional regulator, LacI family. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.665 |
SHF68082.1 | SHF68224.1 | SAMN05444339_11058 | SAMN05444339_11063 | Transcriptional regulator, LacI family. | Beta-mannosidase. | 0.641 |
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