Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE86366.1 | SHF05852.1 | SAMN05444339_102284 | SAMN05444339_103145 | Prephenate dehydrogenase. | Predicted amidophosphoribosyltransferases. | 0.851 |
SHE86366.1 | SHF84791.1 | SAMN05444339_102284 | SAMN05444339_1169 | Prephenate dehydrogenase. | Phage integrase family protein. | 0.468 |
SHE86366.1 | apt | SAMN05444339_102284 | SAMN05444339_106194 | Prephenate dehydrogenase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.840 |
SHF05852.1 | SHE86366.1 | SAMN05444339_103145 | SAMN05444339_102284 | Predicted amidophosphoribosyltransferases. | Prephenate dehydrogenase. | 0.851 |
SHF05852.1 | SHF84791.1 | SAMN05444339_103145 | SAMN05444339_1169 | Predicted amidophosphoribosyltransferases. | Phage integrase family protein. | 0.540 |
SHF05852.1 | apt | SAMN05444339_103145 | SAMN05444339_106194 | Predicted amidophosphoribosyltransferases. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.839 |
SHF84791.1 | SHE86366.1 | SAMN05444339_1169 | SAMN05444339_102284 | Phage integrase family protein. | Prephenate dehydrogenase. | 0.468 |
SHF84791.1 | SHF05852.1 | SAMN05444339_1169 | SAMN05444339_103145 | Phage integrase family protein. | Predicted amidophosphoribosyltransferases. | 0.540 |
SHF84791.1 | apt | SAMN05444339_1169 | SAMN05444339_106194 | Phage integrase family protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.524 |
apt | SHE86366.1 | SAMN05444339_106194 | SAMN05444339_102284 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Prephenate dehydrogenase. | 0.840 |
apt | SHF05852.1 | SAMN05444339_106194 | SAMN05444339_103145 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Predicted amidophosphoribosyltransferases. | 0.839 |
apt | SHF84791.1 | SAMN05444339_106194 | SAMN05444339_1169 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phage integrase family protein. | 0.524 |