STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF99151.1Type II secretory pathway, component ExeA (predicted ATPase). (293 aa)    
Predicted Functional Partners:
SHF99124.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
     0.967
SHF99093.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
     0.960
SHF86800.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
     0.811
SHF86534.1
Exosortase D, VPLPA-CTERM-specific.
 
    0.807
SHF86765.1
Polysaccharide export outer membrane protein.
 
     0.778
SHF50530.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.684
SHF96176.1
Aldo/keto reductase family protein.
   
    0.647
SHF86272.1
O-Antigen ligase.
  
     0.610
SHF85941.1
Glycosyltransferase, GT2 family.
 
     0.589
SHF86709.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.552
Your Current Organism:
Loktanella atrilutea
NCBI taxonomy Id: 366533
Other names: DSM 29326, IAM 15450, JCM 23210, L. atrilutea, Loktanella atrilutea Hosoya and Yokota 2007, NCIMB 14280, strain IG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.