STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE51839.1FAD/FMN-containing dehydrogenase. (435 aa)    
Predicted Functional Partners:
SDE51891.1
Hypothetical protein.
 
     0.946
SDE51806.1
Creatinine amidohydrolase.
 
     0.939
SDE52009.1
Cytosine deaminase.
 
     0.925
SDE51927.1
NitT/TauT family transport system permease protein.
 
     0.883
SDE51960.1
NitT/TauT family transport system ATP-binding protein.
 
     0.846
SDE52044.1
Transcriptional regulator, XRE family with cupin sensor.
 
     0.719
SDF38449.1
Glycolate oxidase iron-sulfur subunit.
 
 
  0.671
SDG69650.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.667
SDG63146.1
Glycolate oxidase.
  
     0.612
SDH21220.1
Glycolate oxidase.
  
     0.610
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.