STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE81852.1Hypothetical protein. (529 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
       0.732
SDG14582.1
Hypothetical protein.
  
     0.561
SDE81880.1
O-succinylbenzoic acid--CoA ligase.
       0.494
SDF51716.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.448
SDE81948.1
ANTAR domain-containing protein.
       0.445
SDG11927.1
Heparin binding hemagglutinin HbhA.
  
     0.436
SDF45574.1
Hypothetical protein.
  
     0.434
SDE79167.1
Glycopeptide antibiotics resistance protein.
  
     0.423
SDF33901.1
Uncharacterized integral membrane protein.
  
     0.413
SDF54957.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.