Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE81880.1 | SDF74633.1 | SAMN05216377_102176 | SAMN05216377_106273 | O-succinylbenzoic acid--CoA ligase. | AMP-binding enzyme C-terminal domain-containing protein. | 0.756 |
SDE81880.1 | SDG24486.1 | SAMN05216377_102176 | SAMN05216377_11041 | O-succinylbenzoic acid--CoA ligase. | fatty-acyl-CoA synthase. | 0.707 |
SDE81880.1 | SDH41925.1 | SAMN05216377_102176 | SAMN05216377_12230 | O-succinylbenzoic acid--CoA ligase. | Acyl transferase domain-containing protein. | 0.927 |
SDE81880.1 | SDH41985.1 | SAMN05216377_102176 | SAMN05216377_12232 | O-succinylbenzoic acid--CoA ligase. | Acyl transferase domain-containing protein. | 0.927 |
SDE81880.1 | SDH42033.1 | SAMN05216377_102176 | SAMN05216377_12233 | O-succinylbenzoic acid--CoA ligase. | Acyl transferase domain-containing protein. | 0.726 |
SDE81880.1 | SDH60509.1 | SAMN05216377_102176 | SAMN05216377_1285 | O-succinylbenzoic acid--CoA ligase. | Amino acid adenylation domain-containing protein. | 0.802 |
SDE81880.1 | SDH60609.1 | SAMN05216377_102176 | SAMN05216377_1287 | O-succinylbenzoic acid--CoA ligase. | Mycobactin phenyloxazoline synthetase. | 0.790 |
SDE81880.1 | menB | SAMN05216377_102176 | SAMN05216377_102177 | O-succinylbenzoic acid--CoA ligase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.980 |
SDE81880.1 | menC | SAMN05216377_102176 | SAMN05216377_10634 | O-succinylbenzoic acid--CoA ligase. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.954 |
SDE81880.1 | rplF | SAMN05216377_102176 | SAMN05216377_102362 | O-succinylbenzoic acid--CoA ligase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.708 |
SDF74633.1 | SDE81880.1 | SAMN05216377_106273 | SAMN05216377_102176 | AMP-binding enzyme C-terminal domain-containing protein. | O-succinylbenzoic acid--CoA ligase. | 0.756 |
SDF74633.1 | SDG24486.1 | SAMN05216377_106273 | SAMN05216377_11041 | AMP-binding enzyme C-terminal domain-containing protein. | fatty-acyl-CoA synthase. | 0.762 |
SDF74633.1 | SDH41925.1 | SAMN05216377_106273 | SAMN05216377_12230 | AMP-binding enzyme C-terminal domain-containing protein. | Acyl transferase domain-containing protein. | 0.927 |
SDF74633.1 | SDH41985.1 | SAMN05216377_106273 | SAMN05216377_12232 | AMP-binding enzyme C-terminal domain-containing protein. | Acyl transferase domain-containing protein. | 0.927 |
SDF74633.1 | SDH42033.1 | SAMN05216377_106273 | SAMN05216377_12233 | AMP-binding enzyme C-terminal domain-containing protein. | Acyl transferase domain-containing protein. | 0.726 |
SDF74633.1 | SDH60509.1 | SAMN05216377_106273 | SAMN05216377_1285 | AMP-binding enzyme C-terminal domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.791 |
SDF74633.1 | SDH60609.1 | SAMN05216377_106273 | SAMN05216377_1287 | AMP-binding enzyme C-terminal domain-containing protein. | Mycobactin phenyloxazoline synthetase. | 0.761 |
SDF74633.1 | rplF | SAMN05216377_106273 | SAMN05216377_102362 | AMP-binding enzyme C-terminal domain-containing protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.708 |
SDG24486.1 | SDE81880.1 | SAMN05216377_11041 | SAMN05216377_102176 | fatty-acyl-CoA synthase. | O-succinylbenzoic acid--CoA ligase. | 0.707 |
SDG24486.1 | SDF74633.1 | SAMN05216377_11041 | SAMN05216377_106273 | fatty-acyl-CoA synthase. | AMP-binding enzyme C-terminal domain-containing protein. | 0.762 |
page 1 of 4