STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE93031.1Cysteine desulfuration protein SufE. (151 aa)    
Predicted Functional Partners:
SDE93063.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
     0.930
SDE55368.1
Cysteine desulfurase family protein, VC1184 subfamily.
  
 0.855
SDF04708.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.855
SDF33283.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.855
SDF26021.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.855
SDE93101.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.714
SDF04753.1
Iron-regulated ABC transporter ATPase subunit SufC.
  
   0.655
SDE92926.1
Hypothetical protein.
       0.553
SDE92957.1
Hypothetical protein.
       0.543
SDE92995.1
TIGR04222 domain-containing protein.
       0.543
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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