Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE66034.1 | SDF11445.1 | SAMN05216377_101450 | SAMN05216377_103290 | DNA polymerase-3 subunit epsilon. | DNA repair photolyase. | 0.407 |
SDE66034.1 | aspS | SAMN05216377_101450 | SAMN05216377_103289 | DNA polymerase-3 subunit epsilon. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.405 |
SDF11323.1 | SDF11366.1 | SAMN05216377_103287 | SAMN05216377_103288 | Hypothetical protein. | Uncharacterized hydrophobic domain-containing protein. | 0.676 |
SDF11323.1 | SDF11445.1 | SAMN05216377_103287 | SAMN05216377_103290 | Hypothetical protein. | DNA repair photolyase. | 0.509 |
SDF11323.1 | aspS | SAMN05216377_103287 | SAMN05216377_103289 | Hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.647 |
SDF11366.1 | SDF11323.1 | SAMN05216377_103288 | SAMN05216377_103287 | Uncharacterized hydrophobic domain-containing protein. | Hypothetical protein. | 0.676 |
SDF11366.1 | SDF11445.1 | SAMN05216377_103288 | SAMN05216377_103290 | Uncharacterized hydrophobic domain-containing protein. | DNA repair photolyase. | 0.655 |
SDF11366.1 | aspS | SAMN05216377_103288 | SAMN05216377_103289 | Uncharacterized hydrophobic domain-containing protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.817 |
SDF11445.1 | SDE66034.1 | SAMN05216377_103290 | SAMN05216377_101450 | DNA repair photolyase. | DNA polymerase-3 subunit epsilon. | 0.407 |
SDF11445.1 | SDF11323.1 | SAMN05216377_103290 | SAMN05216377_103287 | DNA repair photolyase. | Hypothetical protein. | 0.509 |
SDF11445.1 | SDF11366.1 | SAMN05216377_103290 | SAMN05216377_103288 | DNA repair photolyase. | Uncharacterized hydrophobic domain-containing protein. | 0.655 |
SDF11445.1 | aspS | SAMN05216377_103290 | SAMN05216377_103289 | DNA repair photolyase. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.697 |
aspS | SDE66034.1 | SAMN05216377_103289 | SAMN05216377_101450 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | DNA polymerase-3 subunit epsilon. | 0.405 |
aspS | SDF11323.1 | SAMN05216377_103289 | SAMN05216377_103287 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Hypothetical protein. | 0.647 |
aspS | SDF11366.1 | SAMN05216377_103289 | SAMN05216377_103288 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Uncharacterized hydrophobic domain-containing protein. | 0.817 |
aspS | SDF11445.1 | SAMN05216377_103289 | SAMN05216377_103290 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | DNA repair photolyase. | 0.697 |