STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF45907.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
SDG50449.1
Arsenate reductase; Belongs to the ArsC family.
   
   0.839
SDF45952.1
Sodium/proton antiporter, CPA1 family.
       0.773
mshD
Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
 
   0.724
mca
Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
    0.629
SDF46004.1
Gamma-butyrobetaine dioxygenase.
       0.594
SDF66803.1
Cobalamin-independent synthase, Catalytic domain.
  
     0.551
SDF05028.1
ABC-2 type transport system permease protein.
  
     0.533
SDG30129.1
Protein of unknown function.
  
     0.524
SDE55606.1
Probable F420-dependent oxidoreductase, MSMEG_4141 family.
   
    0.519
SDH59567.1
Probable F420-dependent oxidoreductase, MSMEG_4141 family.
   
    0.519
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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