STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF57204.1Nitroreductase. (213 aa)    
Predicted Functional Partners:
SDF57292.1
decaprenylphospho-beta-D-ribofuranose 2-oxidase.
     
 0.706
SDF57249.1
decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase.
       0.701
SDF24203.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.685
SDE81310.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.638
SDG00724.1
Adenylyltransferase and sulfurtransferase.
    
  0.593
SDE59730.1
Probable phosphoglycerate mutase.
    
  0.568
SDG70206.1
PPOX class probable F420-dependent enzyme.
  
    0.546
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
 0.539
SDH13232.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase.
    
 0.533
SDF32610.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.526
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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