Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF46276.1 | SDF46449.1 | SAMN05216377_10526 | SAMN05216377_10530 | MerR family transcriptional regulator, heat shock protein HspR. | Hypothetical protein. | 0.430 |
SDF46276.1 | SDF46495.1 | SAMN05216377_10526 | SAMN05216377_10531 | MerR family transcriptional regulator, heat shock protein HspR. | NlpC/P60 family protein. | 0.425 |
SDF46276.1 | SDF46537.1 | SAMN05216377_10526 | SAMN05216377_10532 | MerR family transcriptional regulator, heat shock protein HspR. | Hypothetical protein. | 0.425 |
SDF46276.1 | SDF46575.1 | SAMN05216377_10526 | SAMN05216377_10533 | MerR family transcriptional regulator, heat shock protein HspR. | Hypothetical protein. | 0.430 |
SDF46276.1 | SDF46614.1 | SAMN05216377_10526 | SAMN05216377_10534 | MerR family transcriptional regulator, heat shock protein HspR. | AAA-like domain-containing protein. | 0.425 |
SDF46276.1 | SDF46659.1 | SAMN05216377_10526 | SAMN05216377_10535 | MerR family transcriptional regulator, heat shock protein HspR. | Hypothetical protein. | 0.425 |
SDF46276.1 | SDF46700.1 | SAMN05216377_10526 | SAMN05216377_10536 | MerR family transcriptional regulator, heat shock protein HspR. | Hypothetical protein. | 0.425 |
SDF46276.1 | dnaJ | SAMN05216377_10526 | SAMN05216377_10527 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.960 |
SDF46276.1 | dnaK | SAMN05216377_10526 | SAMN05216377_10529 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.895 |
SDF46276.1 | grpE | SAMN05216377_10526 | SAMN05216377_10528 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.963 |
SDF46449.1 | SDF46276.1 | SAMN05216377_10530 | SAMN05216377_10526 | Hypothetical protein. | MerR family transcriptional regulator, heat shock protein HspR. | 0.430 |
SDF46449.1 | SDF46495.1 | SAMN05216377_10530 | SAMN05216377_10531 | Hypothetical protein. | NlpC/P60 family protein. | 0.842 |
SDF46449.1 | SDF46537.1 | SAMN05216377_10530 | SAMN05216377_10532 | Hypothetical protein. | Hypothetical protein. | 0.950 |
SDF46449.1 | SDF46575.1 | SAMN05216377_10530 | SAMN05216377_10533 | Hypothetical protein. | Hypothetical protein. | 0.891 |
SDF46449.1 | SDF46614.1 | SAMN05216377_10530 | SAMN05216377_10534 | Hypothetical protein. | AAA-like domain-containing protein. | 0.929 |
SDF46449.1 | SDF46659.1 | SAMN05216377_10530 | SAMN05216377_10535 | Hypothetical protein. | Hypothetical protein. | 0.939 |
SDF46449.1 | SDF46700.1 | SAMN05216377_10530 | SAMN05216377_10536 | Hypothetical protein. | Hypothetical protein. | 0.945 |
SDF46449.1 | dnaJ | SAMN05216377_10530 | SAMN05216377_10527 | Hypothetical protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.433 |
SDF46449.1 | dnaK | SAMN05216377_10530 | SAMN05216377_10529 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.533 |
SDF46449.1 | grpE | SAMN05216377_10530 | SAMN05216377_10528 | Hypothetical protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.438 |
page 1 of 6