STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF47332.1Methyltransferase domain-containing protein. (217 aa)    
Predicted Functional Partners:
SDF47278.1
Hypothetical protein.
       0.773
SDF47383.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.773
SDH42033.1
Acyl transferase domain-containing protein.
   
 0.728
SDH41925.1
Acyl transferase domain-containing protein.
   
 0.693
SDH41985.1
Acyl transferase domain-containing protein.
   
 0.693
SDH32912.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
     
 0.667
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.603
SDF47429.1
Transcriptional regulator, TetR family.
   
   0.596
SDH60509.1
Amino acid adenylation domain-containing protein.
    
 0.549
SDG90646.1
Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.526
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.