Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF75153.1 | SDF75220.1 | SAMN05216377_106285 | SAMN05216377_106286 | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | DNA-binding transcriptional regulator, MarR family. | 0.779 |
SDF75153.1 | SDF75250.1 | SAMN05216377_106285 | SAMN05216377_106287 | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | Hypothetical protein. | 0.600 |
SDF75153.1 | SDF75284.1 | SAMN05216377_106285 | SAMN05216377_106288 | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | Transcriptional regulator, HxlR family. | 0.432 |
SDF75220.1 | SDF75153.1 | SAMN05216377_106286 | SAMN05216377_106285 | DNA-binding transcriptional regulator, MarR family. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | 0.779 |
SDF75220.1 | SDF75250.1 | SAMN05216377_106286 | SAMN05216377_106287 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.547 |
SDF75220.1 | SDF75284.1 | SAMN05216377_106286 | SAMN05216377_106288 | DNA-binding transcriptional regulator, MarR family. | Transcriptional regulator, HxlR family. | 0.439 |
SDF75220.1 | coaE | SAMN05216377_106286 | SAMN05216377_103374 | DNA-binding transcriptional regulator, MarR family. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.469 |
SDF75250.1 | SDF75153.1 | SAMN05216377_106287 | SAMN05216377_106285 | Hypothetical protein. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | 0.600 |
SDF75250.1 | SDF75220.1 | SAMN05216377_106287 | SAMN05216377_106286 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.547 |
SDF75250.1 | SDF75284.1 | SAMN05216377_106287 | SAMN05216377_106288 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.596 |
SDF75284.1 | SDF75153.1 | SAMN05216377_106288 | SAMN05216377_106285 | Transcriptional regulator, HxlR family. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | 0.432 |
SDF75284.1 | SDF75220.1 | SAMN05216377_106288 | SAMN05216377_106286 | Transcriptional regulator, HxlR family. | DNA-binding transcriptional regulator, MarR family. | 0.439 |
SDF75284.1 | SDF75250.1 | SAMN05216377_106288 | SAMN05216377_106287 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.596 |
coaE | SDF75220.1 | SAMN05216377_103374 | SAMN05216377_106286 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | DNA-binding transcriptional regulator, MarR family. | 0.469 |