Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF05535.1 | SDF87951.1 | SAMN05216377_103156 | SAMN05216377_107187 | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | Hypothetical protein. | 0.709 |
SDF05535.1 | SDG15486.1 | SAMN05216377_103156 | SAMN05216377_109173 | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.768 |
SDF70998.1 | SDF87951.1 | SAMN05216377_106183 | SAMN05216377_107187 | Thioredoxin reductase. | Hypothetical protein. | 0.413 |
SDF87919.1 | SDF87951.1 | SAMN05216377_107186 | SAMN05216377_107187 | Proton-dependent oligopeptide transporter, POT family. | Hypothetical protein. | 0.546 |
SDF87951.1 | SDF05535.1 | SAMN05216377_107187 | SAMN05216377_103156 | Hypothetical protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.709 |
SDF87951.1 | SDF70998.1 | SAMN05216377_107187 | SAMN05216377_106183 | Hypothetical protein. | Thioredoxin reductase. | 0.413 |
SDF87951.1 | SDF87919.1 | SAMN05216377_107187 | SAMN05216377_107186 | Hypothetical protein. | Proton-dependent oligopeptide transporter, POT family. | 0.546 |
SDF87951.1 | SDG15486.1 | SAMN05216377_107187 | SAMN05216377_109173 | Hypothetical protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.637 |
SDF87951.1 | trpA | SAMN05216377_107187 | SAMN05216377_101351 | Hypothetical protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.548 |
SDG15486.1 | SDF05535.1 | SAMN05216377_109173 | SAMN05216377_103156 | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.768 |
SDG15486.1 | SDF87951.1 | SAMN05216377_109173 | SAMN05216377_107187 | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | Hypothetical protein. | 0.637 |
trpA | SDF87951.1 | SAMN05216377_101351 | SAMN05216377_107187 | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Hypothetical protein. | 0.548 |