STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF88612.1Luciferase-like monooxygenase. (289 aa)    
Predicted Functional Partners:
SDH20223.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.749
SDE53900.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.693
SDG72478.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.664
SDH59606.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.660
SDG67601.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.648
SDH14262.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
   
 0.641
SDG58288.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.630
SDF72634.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.565
SDG58318.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
  
 0.561
SDE78160.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.554
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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