STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF89872.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (251 aa)    
Predicted Functional Partners:
SDH42033.1
Acyl transferase domain-containing protein.
  
 0.826
SDF89913.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
     0.803
SDH41925.1
Acyl transferase domain-containing protein.
  
 0.802
SDH41985.1
Acyl transferase domain-containing protein.
  
 0.802
SDF89943.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
   0.791
SDG37801.1
3alpha(or 20beta)-hydroxysteroid dehydrogenase.
  
  
 
0.721
SDH67013.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.719
SDE57408.1
Short chain dehydrogenase.
  
     0.698
SDH60509.1
Amino acid adenylation domain-containing protein.
  
 0.682
SDG69650.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.658
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.