STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF98515.1Polyketide cyclase / dehydrase and lipid transport. (155 aa)    
Predicted Functional Partners:
SDF98476.1
DivIVA domain-containing protein.
       0.862
SDF98548.1
DNA-3-methyladenine glycosylase I.
       0.830
SDF98435.1
Glucosyl-3-phosphoglycerate synthase.
       0.676
SDG29738.1
CO or xanthine dehydrogenase, Mo-binding subunit.
    
  0.548
SDF53902.1
Hypothetical protein.
  
     0.547
SDF98588.1
Protein of unknown function.
       0.496
SDF98386.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.488
SDH05918.1
Protein of unknown function.
  
     0.484
SDF98298.1
Hypothetical protein; Belongs to the LOG family.
       0.472
SDF46575.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.