STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29002.1Protein of unknown function. (129 aa)    
Predicted Functional Partners:
SDG69650.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.866
SDF67120.1
Electron transfer flavoprotein beta subunit.
  
 
 0.766
SDF67080.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.744
SDH52982.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.705
SDH15175.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.701
SDG28969.1
Transcriptional regulator, TetR family.
  
    0.599
SDH42033.1
Acyl transferase domain-containing protein.
  
 
 0.571
SDF83897.1
Transcriptional regulator, CarD family.
   
    0.489
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.482
SDG15096.1
FAD binding domain-containing protein.
  
 
  0.447
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (24%) [HD]