STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29183.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (224 aa)    
Predicted Functional Partners:
SDE57515.1
Signal transduction histidine kinase.
  
 0.983
SDH41925.1
Acyl transferase domain-containing protein.
  
 
 0.888
SDH41985.1
Acyl transferase domain-containing protein.
  
 
 0.888
SDG69650.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.871
SDF04568.1
Adenylate cyclase.
 
 
 0.795
SDF83027.1
Z1 domain-containing protein.
    
 0.750
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
   0.748
SDG84751.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
  
 
0.746
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.734
SDE51525.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.731
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.