Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE91689.1 | SDF50592.1 | SAMN05216377_102459 | SAMN05216377_105127 | Exodeoxyribonuclease-3. | Deoxyribonuclease-4. | 0.918 |
SDE91689.1 | SDF84152.1 | SAMN05216377_102459 | SAMN05216377_10782 | Exodeoxyribonuclease-3. | A/G-specific DNA-adenine glycosylase. | 0.927 |
SDE91689.1 | SDG01425.1 | SAMN05216377_102459 | SAMN05216377_108169 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease-3. | 0.932 |
SDE91689.1 | nth | SAMN05216377_102459 | SAMN05216377_110173 | Exodeoxyribonuclease-3. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.987 |
SDE91689.1 | polA | SAMN05216377_102459 | SAMN05216377_103306 | Exodeoxyribonuclease-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.827 |
SDE91689.1 | ung | SAMN05216377_102459 | SAMN05216377_104377 | Exodeoxyribonuclease-3. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.814 |
SDF31294.1 | SDF84152.1 | SAMN05216377_104223 | SAMN05216377_10782 | Endonuclease-8. | A/G-specific DNA-adenine glycosylase. | 0.541 |
SDF31294.1 | coaE | SAMN05216377_104223 | SAMN05216377_103374 | Endonuclease-8. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.557 |
SDF31294.1 | nth | SAMN05216377_104223 | SAMN05216377_110173 | Endonuclease-8. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.704 |
SDF31294.1 | polA | SAMN05216377_104223 | SAMN05216377_103306 | Endonuclease-8. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.852 |
SDF50592.1 | SDE91689.1 | SAMN05216377_105127 | SAMN05216377_102459 | Deoxyribonuclease-4. | Exodeoxyribonuclease-3. | 0.918 |
SDF50592.1 | SDG01425.1 | SAMN05216377_105127 | SAMN05216377_108169 | Deoxyribonuclease-4. | Exodeoxyribonuclease-3. | 0.919 |
SDF50592.1 | nth | SAMN05216377_105127 | SAMN05216377_110173 | Deoxyribonuclease-4. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.830 |
SDF50592.1 | polA | SAMN05216377_105127 | SAMN05216377_103306 | Deoxyribonuclease-4. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.541 |
SDF50592.1 | ung | SAMN05216377_105127 | SAMN05216377_104377 | Deoxyribonuclease-4. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.646 |
SDF84152.1 | SDE91689.1 | SAMN05216377_10782 | SAMN05216377_102459 | A/G-specific DNA-adenine glycosylase. | Exodeoxyribonuclease-3. | 0.927 |
SDF84152.1 | SDF31294.1 | SAMN05216377_10782 | SAMN05216377_104223 | A/G-specific DNA-adenine glycosylase. | Endonuclease-8. | 0.541 |
SDF84152.1 | SDG01425.1 | SAMN05216377_10782 | SAMN05216377_108169 | A/G-specific DNA-adenine glycosylase. | Exodeoxyribonuclease-3. | 0.914 |
SDF84152.1 | nth | SAMN05216377_10782 | SAMN05216377_110173 | A/G-specific DNA-adenine glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.800 |
SDF84152.1 | polA | SAMN05216377_10782 | SAMN05216377_103306 | A/G-specific DNA-adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.463 |
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