Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF08457.1 | SDF67893.1 | SAMN05216377_103224 | SAMN05216377_106108 | Phosphoglucomutase. | Starch phosphorylase. | 0.994 |
SDF08457.1 | SDF68150.1 | SAMN05216377_103224 | SAMN05216377_106114 | Phosphoglucomutase. | Maltokinase. | 0.459 |
SDF08457.1 | SDG09395.1 | SAMN05216377_103224 | SAMN05216377_1097 | Phosphoglucomutase. | 4-alpha-glucanotransferase. | 0.901 |
SDF08457.1 | SDG15926.1 | SAMN05216377_103224 | SAMN05216377_109184 | Phosphoglucomutase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.969 |
SDF08457.1 | SDG23138.1 | SAMN05216377_103224 | SAMN05216377_1107 | Phosphoglucomutase. | Glycogen debranching enzyme (alpha-1,6-glucosidase). | 0.679 |
SDF08457.1 | SDG23606.1 | SAMN05216377_103224 | SAMN05216377_11019 | Phosphoglucomutase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.699 |
SDF08457.1 | glgB | SAMN05216377_103224 | SAMN05216377_106115 | Phosphoglucomutase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.960 |
SDF08457.1 | glgC | SAMN05216377_103224 | SAMN05216377_108103 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.964 |
SDF08457.1 | glgE | SAMN05216377_103224 | SAMN05216377_106109 | Phosphoglucomutase. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.462 |
SDF67893.1 | SDF08457.1 | SAMN05216377_106108 | SAMN05216377_103224 | Starch phosphorylase. | Phosphoglucomutase. | 0.994 |
SDF67893.1 | SDF68150.1 | SAMN05216377_106108 | SAMN05216377_106114 | Starch phosphorylase. | Maltokinase. | 0.887 |
SDF67893.1 | SDG09395.1 | SAMN05216377_106108 | SAMN05216377_1097 | Starch phosphorylase. | 4-alpha-glucanotransferase. | 0.977 |
SDF67893.1 | SDG15926.1 | SAMN05216377_106108 | SAMN05216377_109184 | Starch phosphorylase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.945 |
SDF67893.1 | SDG23138.1 | SAMN05216377_106108 | SAMN05216377_1107 | Starch phosphorylase. | Glycogen debranching enzyme (alpha-1,6-glucosidase). | 0.849 |
SDF67893.1 | SDG23606.1 | SAMN05216377_106108 | SAMN05216377_11019 | Starch phosphorylase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.728 |
SDF67893.1 | glgB | SAMN05216377_106108 | SAMN05216377_106115 | Starch phosphorylase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.996 |
SDF67893.1 | glgC | SAMN05216377_106108 | SAMN05216377_108103 | Starch phosphorylase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.997 |
SDF67893.1 | glgE | SAMN05216377_106108 | SAMN05216377_106109 | Starch phosphorylase. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.926 |
SDF68150.1 | SDF08457.1 | SAMN05216377_106114 | SAMN05216377_103224 | Maltokinase. | Phosphoglucomutase. | 0.459 |
SDF68150.1 | SDF67893.1 | SAMN05216377_106114 | SAMN05216377_106108 | Maltokinase. | Starch phosphorylase. | 0.887 |
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