STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG38706.1SDR family mycofactocin-dependent oxidoreductase. (280 aa)    
Predicted Functional Partners:
SDH42033.1
Acyl transferase domain-containing protein.
  
 0.826
SDH41925.1
Acyl transferase domain-containing protein.
  
 0.802
SDH41985.1
Acyl transferase domain-containing protein.
  
 0.802
SDG38467.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.783
SDH53538.1
7-alpha-hydroxysteroid dehydrogenase.
  
     0.756
SDF03376.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
  
  0.746
SDG24113.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.719
SDG63541.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.705
SDH60509.1
Amino acid adenylation domain-containing protein.
  
 0.682
SDH13455.1
Short-chain dehydrogenase.
  
 
  0.678
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.