STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG53466.1Purine-cytosine permease; Belongs to the purine-cytosine permease (2.A.39) family. (502 aa)    
Predicted Functional Partners:
SDG53513.1
ADP-ribosylglycohydrolase.
 
     0.946
SDG53431.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.929
SDG53552.1
Transcriptional regulator, GntR family.
 
     0.911
SDG53397.1
2'-5' RNA ligase superfamily protein.
       0.655
SDE57515.1
Signal transduction histidine kinase.
    
  0.605
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.557
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
   
    0.510
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
   
    0.489
SDG72152.1
Hypothetical protein.
   
    0.489
SDG46096.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.