STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG61202.1Pimeloyl-ACP methyl ester carboxylesterase. (371 aa)    
Predicted Functional Partners:
SDG61166.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.805
SDG61241.1
Putative glutathione S-transferase.
       0.762
SDH41925.1
Acyl transferase domain-containing protein.
  
 0.760
SDH41985.1
Acyl transferase domain-containing protein.
  
 0.760
SDF89105.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
 
0.686
SDG48399.1
Hypothetical protein.
    
  0.650
SDG60823.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
 
0.644
SDE50394.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
 
0.642
SDG35131.1
ABC-type branched-chain amino acid transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.601
SDH42033.1
Acyl transferase domain-containing protein.
  
 0.590
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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