STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG60032.1Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa)    
Predicted Functional Partners:
SDG59995.1
Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDG59950.1
Urea ABC transporter ATP-binding protein.
 
 0.997
SDG60071.1
Urea-binding protein.
 
 
 0.997
SDG59915.1
Urea ABC transporter ATP-binding protein.
 
 
 0.995
SDH51796.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
SDG87272.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.947
SDF15264.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.941
SDG35165.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.931
SDF15225.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.930
SDG79908.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
 0.930
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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