STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG60427.1Response regulator receiver domain-containing protein. (133 aa)    
Predicted Functional Partners:
SDE57515.1
Signal transduction histidine kinase.
 
 0.975
SDE51525.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.809
SDG09553.1
Anti-anti-sigma factor.
  
 0.809
SDE86452.1
Signal transduction histidine kinase.
   
 0.798
SDG60310.1
Signal transduction histidine kinase.
  
  0.751
SDE55278.1
Two component transcriptional regulator, LuxR family.
  
     0.737
SDE76507.1
Two component transcriptional regulator, LuxR family.
  
     0.734
SDF72067.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.731
SDE52519.1
Two component transcriptional regulator, LuxR family.
  
     0.724
SDF89729.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.722
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.