STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG72332.1Phosphoglycolate phosphatase. (219 aa)    
Predicted Functional Partners:
SDG72299.1
Protein of unknown function.
       0.773
SDG72358.1
Pyruvate dehydrogenase (quinone).
    
  0.724
SDG60741.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.667
SDE82116.1
FAD/FMN-containing dehydrogenase.
    
 0.576
SDG26104.1
FAD/FMN-containing dehydrogenase.
    
 0.576
SDG78119.1
D-lactate dehydrogenase.
    
 0.576
moaA
Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.522
SDG72268.1
PRC-barrel domain-containing protein.
       0.507
SDG72387.1
F420-dependent oxidoreductase, G6PDH family.
       0.486
SDG72241.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
    
 0.404
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.