STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG72780.1Acyl-CoA dehydrogenase. (436 aa)    
Predicted Functional Partners:
SDF67120.1
Electron transfer flavoprotein beta subunit.
 
   0.866
SDF67080.1
Electron transfer flavoprotein alpha subunit apoprotein.
   0.861
SDG72838.1
Acyl-CoA dehydrogenase.
 
  
 
0.856
SDG14425.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.819
SDF27564.1
Hypothetical protein.
  
     0.765
SDE50322.1
Nitronate monooxygenase.
   
 
  0.764
SDG89632.1
Acyl-CoA dehydrogenase.
  
     0.760
SDG03695.1
Acyl-CoA dehydrogenase, N-terminal domain.
  
     0.758
SDE55986.1
Acyl-CoA dehydrogenase.
  
     0.751
SDH51153.1
Acyl-CoA dehydrogenase, C-terminal domain.
  
     0.750
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.