STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG78442.1Glycosyltransferase involved in cell wall bisynthesis. (327 aa)    
Predicted Functional Partners:
SDG78347.1
Glycosyltransferase, GT2 family.
 
    0.957
SDG78592.1
N-terminal domain of galactosyltransferase.
    0.953
SDG78384.1
Glycosyl transferase 4-like domain-containing protein.
 
     0.952
SDG78518.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.918
SDG78478.1
Hypothetical protein.
 
     0.916
SDG78554.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
     0.887
SDG01822.1
ATP-dependent DNA helicase, Rep family.
    
 
 0.707
SDF83426.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.617
SDE61620.1
Maltooligosyl trehalose hydrolase.
   
  0.590
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.590
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.